Best Practices for Migrating from Practice Fusion / Amazing Charts
Moving to a new Electronic Health Records system is a big undertaking for any healthcare practice. When some of the practices already deploy applications like Practice Fusion or Amazing Charts, the migration usually means that they require a more scalable and feature-rich or cloud-based application.
The idea of a better workflow and improved patient care is thrilling, but the reality of the EHR vendor transition is. The essential Practice Fusion data migration and the Amazing Charts data migration should be carefully planned and executed to provide patient safety and regulatory adherence.
Why Medical Practices are leaving Practice Fusion and Amazing Charts
Even though both Practice Fusion and Amazing Charts have served practices in a healthy manner, especially small and solo practices, many organisations are getting alternatives because of the changing needs:
Practice Fusion EMR Shutdown Migration
Practice Fusion underwent a considerable change in many of the needed platforms and a longer-term partnership. The stability of the system, its further evolution, and support are the issues that have led to the pursuit of a new and often cloud-based EHR migration.
Modern Requirement
Modern systems are typically larger than legacy systems. Newer EHRs are more interoperable, easy to connect with other hospitals, labs, and other systems, and have more advanced reporting functions.
They are integrated with Practice Management and Revenue Cycle Management. This is a move toward the single-database system that is all-inclusive, which enhances data flow and reliability.
Cloud vs. On-Premise Limitations
The use of cloud-based EHR can be more modern, scalable, and secure than the practices on a previous local or basic cloud model, and it can alleviate the need to manage backups, security updates, and operating systems on-premises.
Best Practices Migrating from Practice Fusion / Amazing Charts
Phase 1 – Vendor Strategic Planning and Partnership
1. Data Scope and Archive Strategy
Best Practice – Focus on active clinical data and not on historical volume. Narrow down the data to be migrated to only what is needed to ensure that patients are safely and continuously cared for in the last 5 years of encounters, current problem lists, allergies, and medications.
Action – Back-up older and less-frequently accessed records (PDFs, faxes, scanned documents) into a separate, compliant, read-only system. This saves a great deal of time and money on migration and clutter on the new EHR.
2. First HIPAA & Legal Compliance
Best Practice – Get your new EHR seller and any third-party migration consultant to sign a BAA before any data exchange occurs. This is a legal requirement for them to safeguard your Electronic Protected Health Information (ePHI).
Action – Have a HIPAA Risk Assessment of the actual data migration process, which includes the source system, the transfer process, and the target system.
3. Select a Single Database, Interoperable EHR
Best Practice – Choose a modern EHR, which is a single-database system (combination of clinical, billing, and scheduling data). This prevents the problems in the flow and data silos of older bridge-based solutions.
Action – Check that the new EHR meets the current standards of interoperability, such as FHIR and HL7, to ensure easier connectivity in the future.
Related: The Ultimate Guide to Data Cleaning & Normalization in EHR Migration
Phase 2 – Data Integrity and Data Handling
4. Strict Data Cleansing and Standardization
Best Practice – Cleanse the data before migration from Practice Fusion/Amazing Charts. The most common reason for unsuccessful migrations is data quality problems.
Action
With the help of means or services:
- Eliminate duplicate patient information.
- Normalize medical terminology (e.g., transforming inconsistent free-text records to structured and searchable SNOMED or RxNorm codes).
5. Clinically Driven Data Mapping
Best Practice – Authenticate the data mapping against the clinical users. Proper mapping is essential in patient safety.
Action – Have a designated physician/nurse champion read the mapping guidelines of the high-risk data fields, such as medication, allergies, and active diagnoses, to confirm that the new system correctly reads the legacy data.
6. Introduce End-to-End Security Controls
Best Practice – Adhere to the HIPAA Security Rule during the transfer procedure.
Action
- Encryption at rest (AES-256) is to be used on any temporary staging environments.
- Encryption in transit: Use secure protocols (TLS 1.2+ or SFTP) when transferring data.
- Follow the principle of the Minimum Necessary, which means providing access to ePHI only to members of the personnel working on the migration process.
Phase 3 – Implementation, Training, and Go-Live
7. Compulsory User Acceptance Testing
Best Practice – Continuous testing and do not just depend on the technical testing of the vendor.
Action – Perform a Pilot Migration (a small-scale dry run) with a sample set of actual patient charts. Make your clinical and administrative staff actively utilize the test system to:
- Check data integrity (reconciliation).
- Test workflow (e-prescribing, laboratory orders, admission/discharge).
8. Role-Specific Employee Training
Best Practice – It is necessary to invest much in training to eliminate clinician resistance and avoid workflow errors.
Action – Organize specific, practical, job-oriented training (doctors, nurses, and front office employees). Create familiarity using a training environment full of the migrated test data.
9. Phased/Soft Go-Live Strategy
Best Practice – Reduce the interference of patient care during the transition week.
Action – Have a decreased patient load in the first one to two weeks after Go-Live. This provides a soft launch process during which the staff will be able to adapt to the new EHR workflows and fix minor issues without the stress of a full schedule.
10. Extensive Audit Trails and Logging
Best Practice – Be fully accountable and traceable on compliance.
Action – Document and record all the migration procedures, such as the parameters of data extraction original to the final load validation. This audit trail is necessary to prove the integrity of data and show compliance with the regulations of HIPAA.
CapMinds EHR Migration & Integration Services for a Risk-Free Transition
Navigating a Practice Fusion or Amazing Charts migration is complex, but with the right partner, it becomes predictable, secure, and clinically safe.
CapMinds is an end-to-end digital health technology company that guarantees that your data, workflows, and teams get to the new EHR without disturbance.
Our service orientation is aimed at precision, adherence, and performance in the long term. You can switch to a cloud EHR, consolidate systems, modernize your infrastructure, or need help with all the steps of transition; we provide an industry-proven staff to assist with the process.
With CapMinds, you get:
- HIPAA-Compliant Data Migration services – Safe, validated transfer of patient charts, clinical data, and archived records.
- EHR Integration Services – FHIR/HL7-driven interfaces to labs, billing systems, patient portals, and third-party healthcare apps.
- Health IT Consultation Services – Expert guidance on architecture, cloud strategy, interoperability, compliance, and workflow redesign.
CapMinds ensures your new EHR delivers better care, smoother operations, and long-term scalability with zero compromise to data integrity or patient safety. Let’s modernize your practice with confidence.


